Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788251.1_cds_XP_016456045.1_471
CDS Infomation

[gene=LOC107780018] [db_xref=GeneID:107780018] [protein=type I inositol polyphosphate 5-phosphatase 8-like] [protein_id=XP_016456045.1] [location=join(76119..76145,76293..76377,76677..76754,77514..77604,78691..78795,79407..79887,79991..80184,80305..80413,80540..80688,82105..82264)] [gbkey=CDS]
Sequence

ATGAAAACAGAACGAAAAATACCAAAGTCTTCGTGGACTAAAGTGGTGGTTAGGAAATGG
TTGAATATGAAAAGCAAATCGGAGGAATTTTATTCAGATCATATTGTAGATGGGATGGGT
AGAGGAGAAAGAAGAAGGAAGAGTTGCTCAGACGATGGGAGTTGTGTTGTGGTGCCGGAG
GAATTGTCAGAAAGTTGGTTGATGGAAACAAATGATGGAATAATTCAACGGCCAATATTG
GAGAAAGAGGCATCCACTGTCACTGATCTTCAAAACCTTAGGATGTTCGTGGGGACATGG
AATGTAGGAGGCAAGTCACCACACGATGGGTTGAACTTAGAGGACTGGTTGAATTCCACT
GCACCAGCTGACATCTATGTGCTTGGGTTCCAGGAAATTGTCCCTCTAAATGCAGGCAAT
GTACTAGGTCCAGAGGACAGTGGTCCAGCTGCCAAGTGGCTTTCGTTGATTCGTCAATCT
TTGAACAACAACACAAACATCACTAATAACACCCCAAATTCCGAGCGAAAAAGTTCATCC
CCGTCCTTCCATGACTTGCACCAACAACAATCTAACCTTAAACCAAGAATCAGCTTCTCA
GATTTGATCAAATTGGAAAATGAACTCGAGCGAGAAGATTGGGAGAGACTCTTGAGTATG
AATGACGATGGATCGCCCAGTCCAAATTGCATGTCAAATAGATATAACTCTTCTAGCCCT
GAGCAAAATAGATATTGCTTAGCTGCAAGCAAACAAATGGTTGGTTTATTTCTATGCATA
TGGACTCGTACCGACTTGTATCGACACATTAGCAACTTGAAGGTTTCTTGTGTTGGAACG
GGCATCATGGGCTATCTTGGAAATAAGGGTTCAATATCGATCAGTATGACATTGCATCAC
AAGACATTTTGTTTCGTTTGTACTCATTTGGCATCCGGAGAGAAAGAAGGTGATGAGGTT
AAAAGAAATTCAGATGTCATGGAAATTTTAAAGAAAACAAAGTTTTCACATAGTAGGATT
ATTGGAAAACCTCTTCCTCCTGATAATATTTTGGATCATGACAAGATAATTTGGCTTGGA
GATTTGAATTACCGACTTGCATCCGGTTGCGAGGATACCTACGAGTTGGTAAACAACAGT
AACTGGGAAGTACTTCTAGAAAAAGATCAGCTAAGGATAGAGCAAAAAGCAGGACGAGTA
TTCAAAGGTTGGAAAGAAGGAAATATTTACTTTGCTCCAACGTATAAATATCTCTACAAT
TCTGACCATTATGTCGTTCAAACTTGCACATCAAAGGAAAAGCGGCGGACTCCTGCCTGG
TGTGACAGGATATTATGGAAAGGTGAAGGACTAAAACAAATATGTTATGTTAGAGGAGAA
TCAAAGTTCTCAGATCACAGACCAGTCTATTCACTTTTCTCAGTAAATAATTTAATAGAA
AAGTACCAAAGCGAAAAAGAATATTTCACTACCCTTTAG

Peptide Sequence

PEP ID

XP_016456045.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 8-like [Nicotiana tabacum]
Sequence

MKTERKIPKSSWTKVVVRKWLNMKSKSEEFYSDHIVDGMGRGERRRKSCSDDGSCVVVPE
ELSESWLMETNDGIIQRPILEKEASTVTDLQNLRMFVGTWNVGGKSPHDGLNLEDWLNST
APADIYVLGFQEIVPLNAGNVLGPEDSGPAAKWLSLIRQSLNNNTNITNNTPNSERKSSS
PSFHDLHQQQSNLKPRISFSDLIKLENELEREDWERLLSMNDDGSPSPNCMSNRYNSSSP
EQNRYCLAASKQMVGLFLCIWTRTDLYRHISNLKVSCVGTGIMGYLGNKGSISISMTLHH
KTFCFVCTHLASGEKEGDEVKRNSDVMEILKKTKFSHSRIIGKPLPPDNILDHDKIIWLG
DLNYRLASGCEDTYELVNNSNWEVLLEKDQLRIEQKAGRVFKGWKEGNIYFAPTYKYLYN
SDHYVVQTCTSKEKRRTPAWCDRILWKGEGLKQICYVRGESKFSDHRPVYSLFSVNNLIE
KYQSEKEYFTTL

Transcript Sequence

Gene sequence data has not been registered.